Here is the association table of sample names and conditions, colored with respect to condition color used in figures.

File.names Conditions
SCV038 WT_50
SCV039 WT_5000
SCV040 HR_50
SCV041 HR_5000

The Aim of Distriburion Analysis

This part of document includes figures representing the distribution of labels associated with samples. Can give idea about percentage distributions of classes (like: “no signal”, “infection”, “infection&lysis”) and distribution of problematic samples (like: “dirt”, “dried out”, “multiple infections”)

Distibutions

Here once more the figures side by side

Distribution of DDOM

The Aim of Single Variable Analysis

This part of document includes single variable figures associated with samples. We focus on 5 parameters: maximum, shape, midpoint, infection time, start point. For all parameters we investigate either the entire set of infections (i.e both “infection” and “infection & lysis”), or we only investigate the “infection & lysis” cases.

For each figure we include tables showing p-values from t.test, Mann-Whitney U Test (wilcox.test), ,ean differences between conditions and the effect size. The tables also show the sample size for each condition.

Maximum

ttest. adjusted p values

Maximum Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00825 0.74365 0.00030 99
WT_5000 0.00825 1.00000 0.23262 0.25708 354
HR_50 0.74365 0.23262 1.00000 0.03137 87
HR_5000 0.00030 0.25708 0.03137 1.00000 246
numSamples 99 354 87 246

Mann-Whitney U Test, adjusted p values

Maximum Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.02690 1.00000 0.00060 99
WT_5000 0.02690 1.00000 0.13288 0.21082 354
HR_50 1.00000 0.13288 1.00000 0.00880 87
HR_5000 0.00060 0.21082 0.00880 1.00000 246
numSamples 99 354 87 246

Diffrence between means

Maximum Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 0.21622 0.07251 0.30058 99
WT_5000 0.21622 0.00000 0.14371 0.08436 354
HR_50 0.07251 0.14371 0.00000 0.22807 87
HR_5000 0.30058 0.08436 0.22807 0.00000 246
numSamples 99 354 87 246

effect size needed for Power = 0.95 and sig.level = 0.05

Maximum Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 2.896e-01 2.613e-01 3.416e-01 2.598e-01 99
WT_5000 2.613e-01 1.906e-01 3.056e-01 2.017e-01 354
HR_50 3.416e-01 3.056e-01 3.911e-01 3.057e-01 87
HR_5000 2.598e-01 2.017e-01 3.057e-01 2.093e-01 246
numSamples 99 354 87 246

ttest. adjusted p values

Maximum Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00105 1.00000 0.00105 58
WT_5000 0.00105 1.00000 0.14845 1.00000 252
HR_50 1.00000 0.14845 1.00000 0.14845 52
HR_5000 0.00105 1.00000 0.14845 1.00000 190
numSamples 58 252 52 190

Mann-Whitney U Test, adjusted p values

Maximum Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00400 1.00000 0.00150 58
WT_5000 0.00400 1.00000 0.03492 1.00000 252
HR_50 1.00000 0.03492 1.00000 0.02267 52
HR_5000 0.00150 1.00000 0.02267 1.00000 190
numSamples 58 252 52 190

Diffrence between means

Maximum Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 0.32121 0.09007 0.33245 58
WT_5000 0.32121 0.00000 0.23114 0.01124 252
HR_50 0.09007 0.23114 0.00000 0.24238 52
HR_5000 0.33245 0.01124 0.24238 0.00000 190
numSamples 58 252 52 190

effect size needed for Power = 0.95 and sig.level = 0.05

Maximum Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 3.690e-01 3.239e-01 4.811e-01 3.161e-01 58
WT_5000 3.239e-01 2.177e-01 4.119e-01 2.246e-01 252
HR_50 4.811e-01 4.119e-01 5.801e-01 4.084e-01 52
HR_5000 3.161e-01 2.246e-01 4.084e-01 2.284e-01 190
numSamples 58 252 52 190

ttest. adjusted p values

Maximum Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.84520 1.00000 1.00000 41
WT_5000 0.84520 1.00000 0.58235 0.58235 102
HR_50 1.00000 0.58235 1.00000 1.00000 35
HR_5000 1.00000 0.58235 1.00000 1.00000 56
numSamples 41 102 35 56

Mann-Whitney U Test, adjusted p values

Maximum Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.81027 1.00000 1.00000 41
WT_5000 0.81027 1.00000 0.80025 0.80025 102
HR_50 1.00000 0.80025 1.00000 1.00000 35
HR_5000 1.00000 0.80025 1.00000 1.00000 56
numSamples 41 102 35 56

Diffrence between means

Maximum Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 0.12118 0.04117 0.04633 41
WT_5000 0.12118 0.00000 0.16235 0.16751 102
HR_50 0.04117 0.16235 0.00000 0.00516 35
HR_5000 0.04633 0.16751 0.00516 0.00000 56
numSamples 41 102 35 56

effect size needed for Power = 0.95 and sig.level = 0.05

Maximum Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 4.632e-01 3.794e-01 4.561e-01 4.418e-01 41
WT_5000 3.794e-01 2.818e-01 3.787e-01 3.504e-01 102
HR_50 4.561e-01 3.787e-01 4.444e-01 4.388e-01 35
HR_5000 4.418e-01 3.504e-01 4.388e-01 4.159e-01 56
numSamples 41 102 35 56

Here are the figures side by side

Following is the violin graph representing the distribution of maximums

Slope

ttest. adjusted p values

Slope Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.05757 0.20390 0.00000 99
WT_5000 0.05757 1.00000 1.00000 0.00120 354
HR_50 0.20390 1.00000 1.00000 0.00673 87
HR_5000 0.00000 0.00120 0.00673 1.00000 246
numSamples 99 354 87 246

Mann-Whitney U Test, adjusted p values

Slope Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.06573 0.07710 0.00000 99
WT_5000 0.06573 1.00000 1.00000 0.00020 354
HR_50 0.07710 1.00000 1.00000 0.01167 87
HR_5000 0.00000 0.00020 0.01167 1.00000 246
numSamples 99 354 87 246

Diffrence between means

Slope Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 0.09612 0.08550 0.24137 99
WT_5000 0.09612 0.00000 0.01061 0.14525 354
HR_50 0.08550 0.01061 0.00000 0.15587 87
HR_5000 0.24137 0.14525 0.15587 0.00000 246
numSamples 99 354 87 246

effect size needed for Power = 0.95 and sig.level = 0.05

Slope Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.861e-01 1.550e-01 1.887e-01 1.930e-01 99
WT_5000 1.550e-01 1.066e-01 1.603e-01 1.383e-01 354
HR_50 1.887e-01 1.603e-01 1.909e-01 1.997e-01 87
HR_5000 1.930e-01 1.383e-01 1.997e-01 1.698e-01 246
numSamples 99 354 87 246

ttest. adjusted p values

Slope Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.08805 0.65685 0.00160 58
WT_5000 0.08805 1.00000 0.65685 0.02993 252
HR_50 0.65685 0.65685 1.00000 0.02993 52
HR_5000 0.00160 0.02993 0.02993 1.00000 190
numSamples 58 252 52 190

Mann-Whitney U Test, adjusted p values

Slope Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.12923 0.67318 0.00040 58
WT_5000 0.12923 1.00000 0.70317 0.02457 252
HR_50 0.67318 0.70317 1.00000 0.02457 52
HR_5000 0.00040 0.02457 0.02457 1.00000 190
numSamples 58 252 52 190

Diffrence between means

Slope Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 0.11087 0.06243 0.23307 58
WT_5000 0.11087 0.00000 0.04844 0.12219 252
HR_50 0.06243 0.04844 0.00000 0.17063 52
HR_5000 0.23307 0.12219 0.17063 0.00000 190
numSamples 58 252 52 190

effect size needed for Power = 0.95 and sig.level = 0.05

Slope Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 2.350e-01 1.945e-01 2.486e-01 2.465e-01 58
WT_5000 1.945e-01 1.253e-01 2.085e-01 1.633e-01 252
HR_50 2.486e-01 2.085e-01 2.621e-01 2.614e-01 52
HR_5000 2.465e-01 1.633e-01 2.614e-01 2.000e-01 190
numSamples 58 252 52 190

ttest. adjusted p values

Slope Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 1.00000 0.33568 0.33568 41
WT_5000 1.00000 1.00000 0.12180 0.12180 102
HR_50 0.33568 0.12180 1.00000 1.00000 35
HR_5000 0.33568 0.12180 1.00000 1.00000 56
numSamples 41 102 35 56

Mann-Whitney U Test, adjusted p values

Slope Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 1.00000 0.08943 0.08943 41
WT_5000 1.00000 1.00000 0.02465 0.02465 102
HR_50 0.08943 0.02465 1.00000 1.00000 35
HR_5000 0.08943 0.02465 1.00000 1.00000 56
numSamples 41 102 35 56

Diffrence between means

Slope Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 0.02215 0.11427 0.11627 41
WT_5000 0.02215 0.00000 0.13642 0.13842 102
HR_50 0.11427 0.13642 0.00000 0.00200 35
HR_5000 0.11627 0.13842 0.00200 0.00000 56
numSamples 41 102 35 56

effect size needed for Power = 0.95 and sig.level = 0.05

Slope Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 2.865e-01 2.201e-01 2.774e-01 2.721e-01 41
WT_5000 2.201e-01 1.511e-01 2.135e-01 2.030e-01 102
HR_50 2.774e-01 2.135e-01 2.644e-01 2.659e-01 35
HR_5000 2.721e-01 2.030e-01 2.659e-01 2.551e-01 56
numSamples 41 102 35 56

Here are the figures side by side

Following is the violin graph representing the distribution of slopes

Midpoint

ttest. adjusted p values

Midpoint Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00000 1.00000 0.00000 99
WT_5000 0.00000 1.00000 0.00000 0.00002 354
HR_50 1.00000 0.00000 1.00000 0.00000 87
HR_5000 0.00000 0.00002 0.00000 1.00000 246
numSamples 99 354 87 246

Mann-Whitney U Test, adjusted p values

Midpoint Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00000 0.29588 0.00000 99
WT_5000 0.00000 1.00000 0.00000 0.00000 354
HR_50 0.29588 0.00000 1.00000 0.00000 87
HR_5000 0.00000 0.00000 0.00000 1.00000 246
numSamples 99 354 87 246

Diffrence between means

Midpoint Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 2.33079 0.19242 1.59366 99
WT_5000 2.33079 0.00000 2.52320 0.73713 354
HR_50 0.19242 2.52320 0.00000 1.78608 87
HR_5000 1.59366 0.73713 1.78608 0.00000 246
numSamples 99 354 87 246

effect size needed for Power = 0.95 and sig.level = 0.05

Midpoint Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.352e+00 9.942e-01 1.464e+00 9.759e-01 99
WT_5000 9.942e-01 5.962e-01 1.104e+00 6.078e-01 354
HR_50 1.464e+00 1.104e+00 1.576e+00 1.087e+00 87
HR_5000 9.759e-01 6.078e-01 1.087e+00 6.004e-01 246
numSamples 99 354 87 246

ttest. adjusted p values

Midpoint Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00000 1.00000 0.00010 58
WT_5000 0.00000 1.00000 0.00000 0.00000 252
HR_50 1.00000 0.00000 1.00000 0.00052 52
HR_5000 0.00010 0.00000 0.00052 1.00000 190
numSamples 58 252 52 190

Mann-Whitney U Test, adjusted p values

Midpoint Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00000 0.25842 0.00000 58
WT_5000 0.00000 1.00000 0.00000 0.00000 252
HR_50 0.25842 0.00000 1.00000 0.00000 52
HR_5000 0.00000 0.00000 0.00000 1.00000 190
numSamples 58 252 52 190

Diffrence between means

Midpoint Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 2.26723 0.18089 1.40297 58
WT_5000 2.26723 0.00000 2.44813 0.86427 252
HR_50 0.18089 2.44813 0.00000 1.58386 52
HR_5000 1.40297 0.86427 1.58386 0.00000 190
numSamples 58 252 52 190

effect size needed for Power = 0.95 and sig.level = 0.05

Midpoint Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.577e+00 9.940e-01 1.815e+00 1.001e+00 58
WT_5000 9.940e-01 4.161e-01 1.224e+00 4.268e-01 252
HR_50 1.815e+00 1.224e+00 2.045e+00 1.238e+00 52
HR_5000 1.001e+00 4.268e-01 1.238e+00 4.310e-01 190
numSamples 58 252 52 190

ttest. adjusted p values

Midpoint Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00380 1.00000 0.12180 41
WT_5000 0.00380 1.00000 0.00250 0.30470 102
HR_50 1.00000 0.00250 1.00000 0.06717 35
HR_5000 0.12180 0.30470 0.06717 1.00000 56
numSamples 41 102 35 56

Mann-Whitney U Test, adjusted p values

Midpoint Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00000 1.00000 0.00870 41
WT_5000 0.00000 1.00000 0.00000 0.00815 102
HR_50 1.00000 0.00000 1.00000 0.00093 35
HR_5000 0.00870 0.00815 0.00093 1.00000 56
numSamples 41 102 35 56

Diffrence between means

Midpoint Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 1.92665 0.24731 1.18940 41
WT_5000 1.92665 0.00000 2.17396 0.73725 102
HR_50 0.24731 2.17396 0.00000 1.43671 35
HR_5000 1.18940 0.73725 1.43671 0.00000 56
numSamples 41 102 35 56

effect size needed for Power = 0.95 and sig.level = 0.05

Midpoint Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 2.297e+00 2.066e+00 2.340e+00 2.173e+00 41
WT_5000 2.066e+00 1.669e+00 2.145e+00 1.886e+00 102
HR_50 2.340e+00 2.145e+00 2.373e+00 2.228e+00 35
HR_5000 2.173e+00 1.886e+00 2.228e+00 2.031e+00 56
numSamples 41 102 35 56

Here are the figures side by side

Following is the violin graph representing the distribution of midpoints

Infection Time

ttest. adjusted p values

infection time Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.24766 0.01290 0.00035 99
WT_5000 0.24766 1.00000 0.03247 0.00000 354
HR_50 0.01290 0.03247 1.00000 0.35435 87
HR_5000 0.00035 0.00000 0.35435 1.00000 246
numSamples 99 354 87 246

Mann-Whitney U Test, adjusted p values

infection time Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.81428 0.05542 0.00030 99
WT_5000 0.81428 1.00000 0.04110 0.00000 354
HR_50 0.05542 0.04110 1.00000 0.38974 87
HR_5000 0.00030 0.00000 0.38974 1.00000 246
numSamples 99 354 87 246

Diffrence between means

infection time Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 0.39620 0.82745 1.03559 99
WT_5000 0.39620 0.00000 0.43125 0.63939 354
HR_50 0.82745 0.43125 0.00000 0.20814 87
HR_5000 1.03559 0.63939 0.20814 0.00000 246
numSamples 99 354 87 246

effect size needed for Power = 0.95 and sig.level = 0.05

infection time Distribution (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.232e+00 8.418e-01 1.040e+00 8.130e-01 99
WT_5000 8.418e-01 4.439e-01 6.541e-01 4.287e-01 354
HR_50 1.040e+00 6.541e-01 7.581e-01 5.808e-01 87
HR_5000 8.130e-01 4.287e-01 5.808e-01 3.875e-01 246
numSamples 99 354 87 246

ttest. adjusted p values

infection time Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 1.00000 0.42730 0.07435 58
WT_5000 1.00000 1.00000 0.31440 0.00000 252
HR_50 0.42730 0.31440 1.00000 0.59836 52
HR_5000 0.07435 0.00000 0.59836 1.00000 190
numSamples 58 252 52 190

Mann-Whitney U Test, adjusted p values

infection time Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 1.00000 0.65384 0.11665 58
WT_5000 1.00000 1.00000 0.17893 0.00010 252
HR_50 0.65384 0.17893 1.00000 0.65384 52
HR_5000 0.11665 0.00010 0.65384 1.00000 190
numSamples 58 252 52 190

Diffrence between means

infection time Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 0.06500 0.39344 0.59158 58
WT_5000 0.06500 0.00000 0.32844 0.52658 252
HR_50 0.39344 0.32844 0.00000 0.19814 52
HR_5000 0.59158 0.52658 0.19814 0.00000 190
numSamples 58 252 52 190

effect size needed for Power = 0.95 and sig.level = 0.05

infection time Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.159e+00 8.077e-01 1.046e+00 7.629e-01 58
WT_5000 8.077e-01 4.265e-01 7.128e-01 4.077e-01 252
HR_50 1.046e+00 7.128e-01 9.005e-01 6.450e-01 52
HR_5000 7.629e-01 4.077e-01 6.450e-01 3.711e-01 190
numSamples 58 252 52 190

ttest. adjusted p values

infection time Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.50390 0.02993 0.02993 41
WT_5000 0.50390 1.00000 0.02993 0.02993 102
HR_50 0.02993 0.02993 1.00000 1.00000 35
HR_5000 0.02993 0.02993 1.00000 1.00000 56
numSamples 41 102 35 56

Mann-Whitney U Test, adjusted p values

infection time Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.94192 0.06548 0.06548 41
WT_5000 0.94192 1.00000 0.06548 0.06548 102
HR_50 0.06548 0.06548 1.00000 1.00000 35
HR_5000 0.06548 0.06548 1.00000 1.00000 56
numSamples 41 102 35 56

Diffrence between means

infection time Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 0.58060 1.42960 1.35457 41
WT_5000 0.58060 0.00000 0.84900 0.77397 102
HR_50 1.42960 0.84900 0.00000 0.07503 35
HR_5000 1.35457 0.77397 0.07503 0.00000 56
numSamples 41 102 35 56

effect size needed for Power = 0.95 and sig.level = 0.05

infection time Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 2.359e+00 1.706e+00 1.961e+00 1.760e+00 41
WT_5000 1.706e+00 1.059e+00 1.300e+00 1.117e+00 102
HR_50 1.961e+00 1.300e+00 1.331e+00 1.218e+00 35
HR_5000 1.760e+00 1.117e+00 1.218e+00 1.085e+00 56
numSamples 41 102 35 56

Here are the figures side by side

Following is the violin graph representing the distribution of infection time

Start point

ttest. adjusted p values

Start point (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00000 0.17457 0.00014 99
WT_5000 0.00000 1.00000 0.00000 0.00000 354
HR_50 0.17457 0.00000 1.00000 0.00000 87
HR_5000 0.00014 0.00000 0.00000 1.00000 246
numSamples 99 354 87 246

Mann-Whitney U Test, adjusted p values

Start point (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00000 0.01637 0.00000 99
WT_5000 0.00000 1.00000 0.00000 0.00000 354
HR_50 0.01637 0.00000 1.00000 0.00000 87
HR_5000 0.00000 0.00000 0.00000 1.00000 246
numSamples 99 354 87 246

Diffrence between means

Start point (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 2.13269 0.60614 1.07587 99
WT_5000 2.13269 0.00000 2.73883 1.05682 354
HR_50 0.60614 2.73883 0.00000 1.68201 87
HR_5000 1.07587 1.05682 1.68201 0.00000 246
numSamples 99 354 87 246

effect size needed for Power = 0.95 and sig.level = 0.05

Start point (inf + infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.226e+00 9.133e-01 1.342e+00 8.970e-01 99
WT_5000 9.133e-01 5.575e-01 1.026e+00 5.705e-01 354
HR_50 1.342e+00 1.026e+00 1.458e+00 1.012e+00 87
HR_5000 8.970e-01 5.705e-01 1.012e+00 5.666e-01 246
numSamples 99 354 87 246

ttest. adjusted p values

start point Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00000 0.66957 0.00034 58
WT_5000 0.00000 1.00000 0.00000 0.00000 252
HR_50 0.66957 0.00000 1.00000 0.00034 52
HR_5000 0.00034 0.00000 0.00034 1.00000 190
numSamples 58 252 52 190

Mann-Whitney U Test, adjusted p values

start point Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00000 0.15907 0.00004 58
WT_5000 0.00000 1.00000 0.00000 0.00000 252
HR_50 0.15907 0.00000 1.00000 0.00000 52
HR_5000 0.00004 0.00000 0.00000 1.00000 190
numSamples 58 252 52 190

Diffrence between means

start point Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 2.23473 0.37761 1.10718 58
WT_5000 2.23473 0.00000 2.61235 1.12756 252
HR_50 0.37761 2.61235 0.00000 1.48479 52
HR_5000 1.10718 1.12756 1.48479 0.00000 190
numSamples 58 252 52 190

effect size needed for Power = 0.95 and sig.level = 0.05

start point Distribution (infLys)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.373e+00 8.571e-01 1.620e+00 8.850e-01 58
WT_5000 8.571e-01 3.465e-01 1.095e+00 3.753e-01 252
HR_50 1.620e+00 1.095e+00 1.853e+00 1.127e+00 52
HR_5000 8.850e-01 3.753e-01 1.127e+00 4.024e-01 190
numSamples 58 252 52 190

ttest. adjusted p values

start point Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.01755 0.25252 0.63703 41
WT_5000 0.01755 1.00000 0.00010 0.07072 102
HR_50 0.25252 0.00010 1.00000 0.04783 35
HR_5000 0.63703 0.07072 0.04783 1.00000 56
numSamples 41 102 35 56

Mann-Whitney U Test, adjusted p values

start point Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 1.00000 0.00000 0.07322 0.20117 41
WT_5000 0.00000 1.00000 0.00000 0.00007 102
HR_50 0.07322 0.00000 1.00000 0.00017 35
HR_5000 0.20117 0.00007 0.00017 1.00000 56
numSamples 41 102 35 56

Diffrence between means

start point Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 0.00000 1.63635 0.96211 0.51212 41
WT_5000 1.63635 0.00000 2.59846 1.12423 102
HR_50 0.96211 2.59846 0.00000 1.47423 35
HR_5000 0.51212 1.12423 1.47423 0.00000 56
numSamples 41 102 35 56

effect size needed for Power = 0.95 and sig.level = 0.05

start point Distribution (inf)

WT_50 WT_5000 HR_50 HR_5000 numSamples
WT_50 2.251e+00 2.053e+00 2.278e+00 2.130e+00 41
WT_5000 2.053e+00 1.675e+00 2.122e+00 1.874e+00 102
HR_50 2.278e+00 2.122e+00 2.294e+00 2.170e+00 35
HR_5000 2.130e+00 1.874e+00 2.170e+00 1.990e+00 56
numSamples 41 102 35 56

Here are the figures side by side

Following is the violin graph representing the distribution of start point

The Aim

This document includes double variable figures associated with samples. For all parameters we investigate either the entire set of infections (i.e both “infection” and “infection & lysis”), or we only investigate the “infection & lysis” cases. For each graph we plot density and point versions.

The investigated parameter couples are

1.) Midpoint vs Slope 2.) Slope vs Maximum 3.) Midpoint vs Maximum

Midpoint vs Slope

Slope vs Maximum

Midpoint vs Maximum